Structural, Biophysical, and Biochemical Elucidation of the SARS-CoV-2 Nonstructural Protein 3 Macro Domain
Journal
ACS infectious diseases
Journal Volume
6
Journal Issue
11
Pages
2970-2978
Date Issued
2020
Author(s)
Abstract
The pandemic outbreak of a novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has threatened the global public health and economy since late December 2019. SARS-CoV-2 encodes the conserved macro domain within nonstructural protein 3, which may reverse cellular ADP-ribosylation and potentially cut the signal of a viral infection in the cell. Herein, we report that the SARS-CoV-2 macro domain was examined as a poly-ADP-ribose (ADPR) binding module and possessed mono-ADPR cleavage enzyme activity. After confirming the ADPR binding ability via a biophysical approach, the X-ray crystal structure of the SARS-CoV-2 macro domain was determined and structurally compared with those of other viruses. This study provides structural, biophysical, and biochemical bases to further evaluate the role of the SARS-CoV-2 macro domain in the host response via ADP-ribose binding but also as a potential target for drug design against COVID-19. ? 2020 ACS. All rights reserved.
Subjects
ADP-ribose; COVID-19; crystal structure; macro domain; SARS-CoV-2
SDGs
Other Subjects
nonstructural protein 3; poly(adenosine diphosphate ribose); adenosine diphosphate ribose; antivirus agent; viral protein; adenosine diphosphate ribosylation; Article; circular dichroism; conformational transition; controlled study; crystal structure; dissociation constant; enthalpy; entropy; enzyme activity; human; hydrogen bond; isothermal titration calorimetry; ligand binding; nonhuman; priority journal; protein binding; protein structure; Severe acute respiratory syndrome coronavirus 2; stoichiometry; X ray; Betacoronavirus; chemistry; Coronavirus infection; drug design; metabolism; pandemic; protein conformation; protein domain; virology; virus pneumonia; Adenosine Diphosphate Ribose; Antiviral Agents; Betacoronavirus; Coronavirus Infections; Drug Design; Humans; Pandemics; Pneumonia, Viral; Protein Conformation; Protein Domains; Viral Nonstructural Proteins
Type
journal article