Repository logo
  • English
  • 中文
Log In
Have you forgotten your password?
  1. Home
  2. College of Life Science / 生命科學院
  3. Biochemical Sciences / 生化科學研究所
  4. Mass Spectrometry-based Avian Glycomics: Phylogenic Expression of Specific Terminal Glycotopes
 
  • Details

Mass Spectrometry-based Avian Glycomics: Phylogenic Expression of Specific Terminal Glycotopes

Date Issued
2009
Date
2009
Author(s)
Su, Tseng-Hsiung
URI
http://ntur.lib.ntu.edu.tw//handle/246246/178907
Abstract
Abstracthylogenetic expression of Galα1-4Gal glycotope among the avians has recently been systematically investigated by lectin and western blotting. In short, it was shown that only the egg white glycoproteins of avian species belonging to Neoaves but not those of Ratitae and Galloanserae would express this glycotope. However, the precise structures of its glycan carriers have thus far been established only for the pigeon egg white and IgG. Making use of a precious collection of egg white samples from over 1,000 species in hand, a systematic avian egg white glycomic analysis by mass spectrometry was initiated, aiming to map more extensively the phylogenic expression of Galα1-4Gal, along with any other novel epitopes, as well as to define the linkages of terminal sialylation in relation to influenza virus infection. To this end, egg white samples from over 20 avian species representing major taxonomical divisions were processed to release both N- and O-glycans and profiled by MALDI-MS after permethylation. Tentative assignment of the avian glycomic constituents was supported by MS/MS sequencing based on complementary low and high energy collision induced dissociation, as well as multistage activation MSn to define the linkage of sulfation, terminal galactosylation and sialylation. Additional glycomic mapping at the MS2 level by the total ion mapping functionality on a linear ion trap was developed and applied to define the entire sub-glycome on which the Gal-Gal glycotope is carried. Moreover, gel based glycomic analysis of individual protein bands enables a quick assessment of the distribution of individual glycans among distinct egg white glycoproteins. ollectively, applications of the developed experimental glycomic workflow successfully confirmed that Galα1-4Gal is phylogenetically distributed among the avian egg whites. A wide diversity of hybrid and complex type N-glycan structures were structurally defined, along with the identification of terminal Galβ1-4Gal, diLacNAc, LacdiNAc and sulfation. In short, the avian egg white N-glycomic heterogeneity was shown to be mostly due to incomplete α-/β-galactosylation, with or without bisecting GlcNAc, sialylation, and sulfation. In addition, Gal-Gal capping was found to occur not only on the egg white N-glycans but also on O-glycans, albeit much more restrictedly. Sulfation on the avian egg white N-glycans was widely detected and shown to be 6-linked to the terminal Gal residue of a LacNAc antenna, or the GlcNAc residue of the Gal-Gal-GlcNAc sequence. NeuAc-sialylation on gull egg white glycoproteins was shown to be predominantly in α2,3 linkage, whereas those on gull, turkey, guineafowl, and peafowl IgG samples prevailed in α2,6 form. Finally, gel-based analysis of a selected few egg white samples demonstrated that a significant difference in glycosylation profiles may exist among individual glycoprotein carriers for at least one avian species, but can be rather similar for others.
Subjects
mass spectrometry
avian
glycotope
glycomics
File(s)
Loading...
Thumbnail Image
Name

ntu-98-R96b46009-1.pdf

Size

23.32 KB

Format

Adobe PDF

Checksum

(MD5):a224f3c2b8d87795fc5a6fb573539297

臺大位居世界頂尖大學之列,為永久珍藏及向國際展現本校豐碩的研究成果及學術能量,圖書館整合機構典藏(NTUR)與學術庫(AH)不同功能平台,成為臺大學術典藏NTU scholars。期能整合研究能量、促進交流合作、保存學術產出、推廣研究成果。

To permanently archive and promote researcher profiles and scholarly works, Library integrates the services of “NTU Repository” with “Academic Hub” to form NTU Scholars.

總館學科館員 (Main Library)
醫學圖書館學科館員 (Medical Library)
社會科學院辜振甫紀念圖書館學科館員 (Social Sciences Library)

開放取用是從使用者角度提升資訊取用性的社會運動,應用在學術研究上是透過將研究著作公開供使用者自由取閱,以促進學術傳播及因應期刊訂購費用逐年攀升。同時可加速研究發展、提升研究影響力,NTU Scholars即為本校的開放取用典藏(OA Archive)平台。(點選深入了解OA)

  • 請確認所上傳的全文是原創的內容,若該文件包含部分內容的版權非匯入者所有,或由第三方贊助與合作完成,請確認該版權所有者及第三方同意提供此授權。
    Please represent that the submission is your original work, and that you have the right to grant the rights to upload.
  • 若欲上傳已出版的全文電子檔,可使用Open policy finder網站查詢,以確認出版單位之版權政策。
    Please use Open policy finder to find a summary of permissions that are normally given as part of each publisher's copyright transfer agreement.
  • 網站簡介 (Quickstart Guide)
  • 使用手冊 (Instruction Manual)
  • 線上預約服務 (Booking Service)
  • 方案一:臺灣大學計算機中心帳號登入
    (With C&INC Email Account)
  • 方案二:ORCID帳號登入 (With ORCID)
  • 方案一:定期更新ORCID者,以ID匯入 (Search for identifier (ORCID))
  • 方案二:自行建檔 (Default mode Submission)
  • 方案三:學科館員協助匯入 (Email worklist to subject librarians)

Built with DSpace-CRIS software - Extension maintained and optimized by 4Science