BIO101-EST sequence management and annotation system
Journal
Proceedings of the Fifth IEEE International Symposium on Signal Processing and Information Technology
Journal Volume
2005
Pages
40-45
Date Issued
2005
Author(s)
Abstract
Laboratories worldwide are working on EST cDNA library and microarray projects, each project involving hundreds to hundreds of thousands of clones. To support the needs of individual laboratories, an efficient EST sequence management system is needed. Here we describe BIO101, a centralized approach to laboratory EST sequence management and functional annotation. The system includes a) laboratory-based authorization, project-focused and custom database management features; b) a pipeline with integrated tools for producing and clustering high-quality ESTs and for identifying homologues; c) a pipeline scheduling mechanism that emphasizes fairness; and d) collaborative manual and automatic functional annotation features. BIO101 is accessible to registered members at http://bio101.iis.sinica.edu.tw/. © 2005 IEEE.
Subjects
Annotation; Expressed sequence tags; Sequence management
Other Subjects
Database systems; DNA; Quality assurance; Scheduling; Annotation; Expressed sequence tags; Laboratory based authorization; Sequence management; Management information systems
Type
conference paper
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