Dynamics of the Eigen and the Crow-Kimura models for molecular evolution
Journal
Physical review. E, Statistical, nonlinear, and soft matter physics
Journal Volume
78
Journal Issue
4 Pt 1
Date Issued
2008-10
Author(s)
Abstract
We introduce an alternative way to study molecular evolution within well-established Hamilton-Jacobi formalism, showing that for a broad class of fitness landscapes it is possible to derive dynamics analytically within the 1N accuracy, where N is the genome length. For a smooth and monotonic fitness function this approach gives two dynamical phases: smooth dynamics and discontinuous dynamics. The latter phase arises naturally with no explicite singular fitness function, counterintuitively. The Hamilton-Jacobi method yields straightforward analytical results for the models that utilize fitness as a function of Hamming distance from a reference genome sequence. We also show the way in which this method gives dynamical phase structure for multipeak fitness.
Subjects
Quantitative Biology - Populations and Evolution; Quantitative Biology - Populations and Evolution; Quantitative Biology - Quantitative Methods
Description
7 pages
Type
journal article