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  4. Deep neural networks enabled isotropic quantitative differential phase contrast microscopy
 
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Deep neural networks enabled isotropic quantitative differential phase contrast microscopy

Journal
Proceedings of SPIE - The International Society for Optical Engineering
Journal Volume
11925
ISBN
9781510647190
Date Issued
2021-01-01
Author(s)
Li, An Cin
Lin, Yu Hsiang
HSUAN-MING HUANG  
YUAN LUO  
DOI
10.1117/12.2615974
URI
https://scholars.lib.ntu.edu.tw/handle/123456789/615816
URL
https://scholars.lib.ntu.edu.tw/handle/123456789/590332
Abstract
Isotropic quantitative differential phase contrast (iDPC) microscopy based on pupil engineering has made significant improvement in reconstructing phase image of weak phase objects. In previous researches, the pupil designs have been investigated for enhancing the data acquisition efficiency. To further improve the phase retrieval procedure in iDPC, we adapt deep neural networks to achieve isotropic phase distribution from half-pupil based quantitative differential phase contrast (qDPC) microscopy. In this study, we utilized U-net model for mapping from 1-axis phase reconstruction to 12- axis one. The results show that the deep neural network we proposed achieved expecting performance. The final testing loss value of our model after 1000 epochs of training achieved 6.7e-5 after normalized. The peak signal to noise ratio improvement is from 26dB to 30dB.
Subjects
Deep neural network | Isotropic quantitative differential phase contrast microscopy | Patch-based | Phase retrieval
Type
conference paper

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