范文祥臺灣大學：物理研究所張瑜家Chang, Yu-ChiaYu-ChiaChang2007-11-262018-06-282007-11-262018-06-282004http://ntur.lib.ntu.edu.tw//handle/246246/54608A single-molecule fluorescence polarization (SMFP) detecting system enables us to investigate the time evolution of the dipole orientation of a chromophore. It has applications for a variety of studies such as determine the protein structure, detecting the rotational motion of a protein, characterizing the properties of a membrane, and so on. Within the framework of this thesis, we have successfully developed a SMFP detecting system by employing a polarization beamsplitter cube into a double-port scanning confocal microscope. The intensity ratio of the two linearly perpendicular polarization states emerging from the two ports of this system is 1:3 when a circular polarized light was incident into the system. Thin polystyrene films containing isolated DiIC18(3) small molecules which are commonly used in the membrane study consisting of only one chromophore were prepared to test the SMFP detecting system. As to the single-molecule detection, reducing background fluorescence and increasing signal to noise (S/N) ratio are two crucial issues. Cleaner implements used in the sample preparation not only can enlarge the S/N ratio but also can prevent quenching effect from taking place. With the effort on the removal of the contaminants introduced in the sample preparation processes we found out that polluted pipette may easily contaminate solvents in use, even when disposable tips are used and presumably the solvents wouldn’t have contact with the inner of the pipette. To examine the background intensity of the sample, it has been found out that the incident light with 1Contents 1. Introduction...3 1.1 Motivation...3 1.2 Properties of DiI molecules...5 2. Photophysics....8 2.1 Molecular Excitation and Fluorescence…8 2.2 Quenching of Fluorescence…10 2.3 Estimation of the DiI Fluorescence Intensity...12 3. Experiment Setup…16 3.1 Confocal microscopy…16 3.2 Polarization Beamsplitter Cube….20 3.3 The SMFP Setup...22 4. Sample preparation..26 4.1 Cleaning Process...26 4.2 The Preparation of DiI Sample….27 5. Experiment Result…30 5.1 The origin of the contamination...30 5.2 Background of the Sample and preliminary tests of SMFP detecting system...36 6. Summary and outlook…40 Reference…421877798 bytesapplication/pdfen-US單分子螢光偏振系統螢光single-moleculefluorescencefluorescence polarization detecting systemthesishttp://ntur.lib.ntu.edu.tw/bitstream/246246/54608/1/ntu-93-R90222029-1.pdf